Detail of GM0062


Summary

The genetically modified enzybiotic, named Lg12-1 , constructed by Mutagenesis strategy, decrease the lytic activity.
With  Lg12-1
  Sequence Length:  310 AA.
  Mass:  33643.3 Da.
  Isoelectric Point:  8.85
  Function:  has no lytic activity

Construction

GM0062, constructed by Mutagenesis strategy.
    No schema construted on GM0062
Details:
GM0062[1-310]: derive from protein Q65YV6 sequence 1-310

Q65YV6, 310 AA., the Lysin from Lactobacillus phage phigaY

Source: Lactobacillus phage phigaY

Domains and repeats

4-209:  IPR013781, the Glycoside hydrolase, catalytic domain
235-305:  IPR003646, the SH3-like domain, bacterial-type

GO term prediction

Biological Process:  0005975, the carbohydrate metabolic process
Biological Process:  0009253, the peptidoglycan catabolic proces
Biological Process:  0016998, the peptidoglycan catabolic proces
Molecular Function:  0003796, the lysozyme activity


Linking to UniprotKB
Linging to InterPro

Annotation

1-310

1-206
: EAD, domain, derived from Lactobacillus gasseri JCM 1131T phage ??gaY endolysin,LysgaY;
217-310
: CBD, SH3bgaY domain, derived from Lactobacillus gasseri JCM 1131T phage ??gaY endolysin,LysgaY;
12
: MUT, mutation with D12G ;
Domain and repeats:
235-305
: IPR003646,SH3-like domain, bacterial-type;
4-209
: IPR013781,Glycoside hydrolase, catalytic domain;
GO term prediction:
0005975, the carbohydrate metabolic process
MVEVAKRSYGVGVSSHNNGNYSGSKFAVVKVSEGLDYRNPKAQSQVSTARANSMLPMAYHYARFSGNSNVAIQEGNYAVTSAKAVGLEAGTYLACDYEQGSGNETRGDRETNTTAILSFLDTIVGAGYKPLLYSGAYLMRDKINTSRILAKYPNCLWVAAYPSGNGTAVSEPNFGYFPSMNGVAIWQFTDNWRGLNVDGNISLIDLKNDSKPVAQPSVAQSASEKTWTDVQGMTWHEEHGTFITGGAINLRWGANTQSTLITTLPAGSEVKYNAWARDSAGRVWLQQPRENGKNGYLVGRVGSEPWGTFK
  BlastP to GMEnzy

Production

  1.  Expressed by pUC119 in E. coli MV1184 sus?,  Purified by His-bind kit (Novagen, Germany) and Sephacryl S-200 HR

Activity

    No activity data found on GM0062

Reference

  1. Sugahara, K.Yokoi, K. J.Nakamura, Y.Nishino, T.Yamakawa, A.Taketo, A.Kodaira, K.. (2007) Mutational and biochemical analyses of the endolysin Lys(gaY) encoded by the Lactobacillus gasseri JCM 1131T phage phi gaY. Gene. 00:41-52. [doi:10.1016/j.gene.2007.08.023] [PMID:17920212]

Comments

    No comments found on GM0062


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