Detail of GM0096


Summary

The genetically modified enzybiotic, named endo/ami , constructed by Truncation strategy, keep the lytic activity.
With  endo/ami
  Sequence Length:  367 AA.
  Mass:  41181.5 Da.
  Isoelectric Point:  8.94
  Function:  Lytic activity of the phi11 endolysin on heat-killed staphylococ-cal cells was abolished while retained nearly all of its lytic activity on SDS cell walls

Construction

GM0096, constructed by Truncation strategy.
    No schema construted on GM0096
Details:
GM0096[1-370]: derive from protein Q8SDS7 sequence 1-370

Q8SDS7, 481 AA., the Amidase from Staphylococcus phage phi11 (Bacteriophage phi-11)

Source: Staphylococcus phage phi11 (Bacteriophage phi-11)

Domains and repeats

7-148:  IPR007921, the CHAP domain
188-338:  IPR002502, the N-acetylmuramoyl-L-alanine amidase domain
395-466:  IPR003646, the SH3-like domain, bacterial-type

GO term prediction

Biological Process:  0009253, the peptidoglycan catabolic process
Molecular Function:  0008745, the N-acetylmuramoyl-L-alanine amidase activity?


Linking to UniprotKB
Linging to InterPro

Annotation

1-370

7-148
: EAD, Endopeptidase domain, derived from S. aureus NCTC8325 bacteriophages ??11;
188-338
: EAD, Amidase domain, derived from S. aureus NCTC8325 bacteriophages ??12;
Domain and repeats:
188-338
: IPR002502,N-acetylmuramoyl-L-alanine amidase domain;
7-148
: IPR007921,CHAP domain;
GO term prediction:
0008745, the N-acetylmuramoyl-L-alanine amidase activity
0009253, the peptidoglycan catabolic process
MQAKLTKNEFIEWLKTSEGKQFNVDLWYGFQCFDYANAGWKVLFGLLLKGLGAKDIPFANNFDGLATVYQNTPDFLAQPGDMVVFGSNYGAGYGHVAWVIEATLDYIIVYEQNWLGGGWTDGIEQPGWGWEKVTRRQHAYDFPMWFIRPNFKSETAPRSVQSPTQAPKKETAKPQPKAVELKIIKDVVKGYDLPKRGSNPKGIVIHNDAGSKGATAEAYRNGLVNAPLSRLEAGIAHSYVSGNTVWQALDESQVGWHTANQIGNKYYYGIEVCQSMGADNATFLKNEQATFQECARLLKKWGLPANRNTIRLHNEFTSTSCPHRSSVLHTGFDPVTRGLLPEDKRLQLKDYFIKQIRAYMIPVATVS
  BlastP to GMEnzy

Production

  1.  Expressed by pET22b in E. coli BL21(DE3),  Purified by nickel-nitrilotriacetic acid affinity chromatography

Activity

    No activity data found on GM0096

Reference

  1. Sass, P.Bierbaum, G.. (2007) Lytic activity of recombinant bacteriophage phi11 and phi12 endolysins on whole cells and biofilms of Staphylococcus aureus. Applied and environmental microbiology. 01:347-352. [doi:10.1128/AEM.01616-06] [PMID:17085695] [FULL TEXT]

Comments

    No comments found on GM0096


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