Record in detail


General Info

  • lamp_id:L01A000559
  • Name:PA3B_RANPA
  • FullName:Palustrin-3b
  • Source:Rana palustris
  • Mass:4906.8 Da
  • Sequence Length:48 aa
  • Isoelectric Point:10.06
  • Activity:Antibacterial
  • Sequence
        GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLSNIGNTGCNEDEC
  • Function:Antimicrobial activity against Gram-negative bacterium E.coli.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L12A07029|    From 39 To 86 E-value: 3e-21 Score: 92
        GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLNNIGNTGCNEDEC
  • 2. L12A07028|    From 39 To 86 E-value: 3e-21 Score: 92
        GIFPKIIGKGIKTGIVNGIKNLVKGVGMKVFKAGLSNIGNTGCNEDEC
  • 3. L01A000559    From 1 To 48 E-value: 4e-21 Score: 91.7
        GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLSNIGNTGCNEDEC
  • 4. L01A000569    From 1 To 48 E-value: 1e-20 Score: 90.1
        GIFPKIIGKGIKTGIVNGIKSLVKGVGMKVFKAGLNNIGNTGCNEDEC
  • 5. L02A001271    From 1 To 45 E-value: 0.00000000000001 Score: 70.5
        GIFPKIIGKGI----VNGIKSLAKGVGMKVFKAGLNNIGNTGCNNRDEC

Structure

  •   Domains

    •     No domains found on LAMP database
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities
  •   1  Target:  E.coli  MIC:  4.91 μg/ml  (1.00065 μM)  

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Conlon J.M.,Dulka J.,Knoop F.C.,Basir Y.J.,
  •   Title:Multiple antimicrobial peptides and peptides related to bradykinin and neuromedin N isolated from skin secretions of the pickerel frog, Rana palustris.
  •   Journal:Biochim. Biophys. Acta, 2000, 1543, 95-105  [PubMed:11087945]

Comments

  •   Comments

    •     No comments found on LAMP database



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