Record in detail


General Info

  • lamp_id:L01A000573
  • Name:CBB1_CARML
  • FullName:Bacteriocin carnobacteriocin BM1
  • Source:Carnobacterium maltaromaticum
  • Mass:4527.2 Da
  • Sequence Length:43 aa
  • Isoelectric Point:8.76
  • Activity:Antibacterial
  • Sequence
        AISYGNGVYCNKEKCWVNKAENKQAITGIVIGGWASSLAGMGH
  • Function:Has antibacterial activity against Listeria and Enterococcus.

Cross-Linking

  •   Cross-linking
  •   1  Database:APD  636
  •   2  Database:APD  923
  •   3  Database:CAMP  CAMPSQ535
  •   4  Database:DBAASP  6216
  •   5  Database:dbAMP  dbAMP_00283
  •   6  Database:DRAMP  DRAMP00091
  •   7  Database:SATPdb  satpdb17317
  •   8  Database:Uniprot  P38579
  •   9  Database:BAC  BAC069
  •   10  Database:BAC  BAC075

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L12A08227|    From 19 To 61 E-value: 3e-20 Score: 89
        AISYGNGVYCNKEKCWVNKAENKQAITGIVIGGWASSLAGMGH
  • 2. L01A000573    From 1 To 43 E-value: 6e-20 Score: 87.8
        AISYGNGVYCNKEKCWVNKAENKQAITGIVIGGWASSLAGMGH
  • 3. L11A001186    From 1 To 43 E-value: 4e-19 Score: 85.1
        AISYGNGVYCNKEKCWVNKAENKQAITGIVIGGWASSLAGXGH
  • 4. L12A02699|    From 15 To 55 E-value: 0.00000000000005 Score: 68.2
        SYGNGVYCNKQKCWVNWNEAKQQIAGIVIGGWASSLASMGR
  • 5. L12A09063|    From 31 To 71 E-value: 0.0000000000004 Score: 65.1
        SYGNGVYCNNSKCWVNWGEAKENIAGIVISGWASGLAGMGH

Structure

  •   Domains
  •   1  Name:Bacteriocin_IIa    Interpro Link:IPR002633
  •   2  Name:Bacteriocin_IIa_CS    Interpro Link:IPR023384
  •   3  Name:Bacteriocin_IIa_dom    Interpro Link:IPR023388
  •   4  Name:Bacteriocin_signal_motif    Interpro Link:IPR010133
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities
  •   1  Target:  C. divergens LV13  MIC:  93 μg/ml  (20.5425 μM)  
  •   2  Target:  C. piscicola UAL26  MIC:  128 μg/ml  (28.2735 μM)  
  •   3  Target:  Lactobacillus plantarum ATCC 4008  MIC:  8 μg/ml  (1.7671 μM)  
  •   4  Target:  Pediococcus parvulus ATCC 19371  MIC:  8 μg/ml  (1.7671 μM)  
  •   5  Target:  Listeria monocytogenes ATCC 15313  MIC:  64 μg/ml  (14.1368 μM)  
  •   6  Target:  Listeria innocua ATCC 33090  MIC:  32 μg/ml  (7.06839 μM)  
  •   7  Target:  Enterococcus faecium ATCC 11576  MIC:  16 μg/ml  (3.53419 μM)  
  •   8  Target:  Enterococcus faecalis ATCC 19433  MIC:  32 μg/ml  (7.06839 μM)  
  •   9  Target:  E. faecium ATCC 19434  MIC:  8 μg/ml  (1.7671 μM)  

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Stiles M.E.,Vederas J.C.,Roy K.L.,Sailer M.,Quadri L.E.N.,
  •   Title:Chemical and genetic characterization of bacteriocins produced by Carnobacterium piscicola LV17B.
  •   Journal:J. Biol. Chem., 1994, 269, 12204-12211  [MEDLINE:94216339]

Comments

  •   Comments

    •     No comments found on LAMP database



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