Record in detail


General Info

  • lamp_id:L01A000605
  • Name:PAFP_PHYAM
  • FullName:Antimicrobial peptide 1
  • Source:Phytolacca americana
  • Mass:3935.4 Da
  • Sequence Length:38 aa
  • Isoelectric Point:8.61
  • Activity:Antibacterial, Antifungal
  • Sequence
        AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR
  • Function:Possesses antifungal activity.

Cross-Linking

  •   Cross-linking
  •   1  Database:APD  479
  •   2  Database:APD  916
  •   3  Database:CAMP  CAMPSQ565
  •   4  Database:DBAASP  5107
  •   5  Database:dbAMP  dbAMP_00196
  •   6  Database:DRAMP  DRAMP01055
  •   7  Database:SATPdb  satpdb25694
  •   8  Database:Uniprot  P81418

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L03A000098    From 28 To 65 E-value: 6e-18 Score: 81.3
        AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR
  • 2. L01A000605    From 1 To 38 E-value: 1e-16 Score: 77
        AGCIKNGGRCNASAGPPYCCSSYCFQIAGQSYGVCKNR
  • 3. L02A000917    From 2 To 37 E-value: 0.000000000002 Score: 63.2
        CIKNGGRCVASGGPPYCCSNYCLQIAGQSYGVCKKH
  • 4. L03A000073    From 24 To 61 E-value: 0.0000000004 Score: 55.1
        AQCIGNGGRCNENVGPPYCCSGFCLRQPGQGYGYCKNR
  • 5. L03A000097    From 28 To 63 E-value: 0.0000000009 Score: 53.9
        CIGNGGRCNENVGPPYCCSGFCLRQPNQGYGVCRNR

Structure

  •   Domains
  •   1  Name:Antimicrobial_C6_CS    Interpro Link:IPR013006
  •   2  Name:Gurmarin/antifun_pep    Interpro Link:IPR009101
  •   3  Name:Gurmarin/antimicrobial_peptd    Interpro Link:IPR024206
  •   Structures

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Peng C.,Ren F.,Xu C.,Luo J.,Liu Y.,
  •   Title:Purification, characterization, and molecular cloning of the gene of a seed-specific antimicrobial protein from pokeweed.
  •   Journal:Plant Physiol., 2000, 122, 1015-1024  [MEDLINE:20223716]
  •   [2]  Hu Z.,Wang J.-F.,Dai J.-X.,Liu W.,Gao G.-H.,
  •   Title:Solution structure of PAFP-S: a new knottin-type antifungal peptide from the seeds of Phytolacca americana.
  •   Journal:Biochemistry, 2001, 40, 10973-10978  [PubMed:11551192]

Comments

  •   Comments

    •     No comments found on LAMP database



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