Record in detail
General Info
- lamp_id:L01A002690
- Name:SNAK2_SOLTU
- FullName:Snakin-2
- Source:Solanum tuberosum
- Mass:7037 Da
- Sequence Length:66 aa
- Isoelectric Point:8.83
- Activity:Antibacterial, Antifungal
- Sequence
YSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP - Function:Has an antimicrobial activity. Causes a rapid aggregation of both Gram-positive and Gram-negative bacteria, but the antimicrobial activity is not correlated with the capacity to aggregate bacteria.
Cross-Linking
- Cross-linking
- 1 Database:APD 992
- 2 Database:CAMP CAMPSQ745
- 3 Database:DBAASP 1721
- 4 Database:dbAMP dbAMP_12296
- 5 Database:DRAMP DRAMP00276
- 6 Database:Uniprot Q93X17
- 7 Database:PHY PHYT00254
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L01A002690 From 1 To 66 E-value: 1e-32 Score: 129
YSYKKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP - 2. L12A01216| From 2 To 66 E-value: 2e-31 Score: 125
SYKKIDCGGACAARCRLSSRPRLCHRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP - 3. L12A11355| From 1 To 65 E-value: 2e-31 Score: 125
SYKKIDCGGACAARCRLSSRPRLCHRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP - 4. L01A000889 From 36 To 99 E-value: 2e-27 Score: 112
LQQIDCNGACAARCRLSSRPRLCQRACGTCCRRCNCVPPGTAGNQEVCPCYASLTTHGGKRKCP - 5. L01A000866 From 13 To 75 E-value: 2e-26 Score: 108
KKIDCGGACAARCQLSSRPHLCKRACGTCCARSRCVPPGTAGNQEMCPCYASLTTHGGKRKCP
Activity
- Antibacterial Activities
- 1 Target: Clavibacter michiganensis EC: 7.04 μg/ml (1.00043 μM)
- 2 Target: R. solanacearum rfa- EC: 211.11 μg/ml (30 μM)
- 3 Target: Rhizobium meliloti EC: 56.3 μg/ml (8.00057 μM)
- 4 Target: Botrytis cinerea EC: 14.07 μg/ml (1.99943 μM)
- 5 Target: Fusarium solani EC: 14.07 μg/ml (1.99943 μM)
- 6 Target: Fusarium culmorum EC: 14.07 μg/ml (1.99943 μM)
- 7 Target: Fusarium oxysporum f. sp. conglutinans EC: 70.37 μg/ml (10 μM)
- 8 Target: Fusarium oxysporum f. sp. lycopersici EC: 140.74 μg/ml (20 μM)
- 9 Target: Plectosphaerella cucumerina EC: 70.37 μg/ml (10 μM)
- 10 Target: Colletotrichum graminicola EC: 70.37 μg/ml (10 μM)
- 11 Target: Colletotrichum lagenarium EC: 70.37 μg/ml (10 μM)
- 12 Target: Bipolaris maydis EC: 140.74 μg/ml (20 μM)
- 13 Target: Aspergillus flavus EC: 140.74 μg/ml (20 μM)
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Garcia-Olmedo F.,Lopez G.,Moreno M.,Segura A.,Berrocal-Lobo M.,
- Title:Snakin-2, an antimicrobial peptide from potato whose gene is locally induced by wounding and responds to pathogen infection.
- Journal:Plant Physiol., 2002, 128, 951-961 [PubMed:11891250]
Comments
- Comments
No comments found on LAMP database