Record in detail
General Info
- lamp_id:L01A003055
- Name:DEF1_TRIKH
- FullName:Defensin Tk-AMP-D1
- Source:Triticum kiharae
- Mass:5744.3 Da
- Sequence Length:49 aa
- Isoelectric Point:7.99
- Activity:Antimicrobial
- Sequence
RTCQSQSHKFKGACFSDTNCDSVCRTENFPRGQCNQHHVERKCYCERDC - Function:Has weak antifungal activity against F.graminearum and F.verticillioides below 30 ug/ml, but not against A.consortiale B.cinerea, H.sativum, F.culmorum, C.graminicola and D.maydis.
Cross-Linking
- Cross-linking
- 1 Database:CAMP CAMPSQ1641
- 2 Database:DBAASP 3189
- 3 Database:dbAMP dbAMP_10805
- 4 Database:DRAMP DRAMP00441
- 5 Database:SATPdb satpdb11532
- 6 Database:Uniprot P84963
- 7 Database:PHY PHYT00013
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L01A003055 From 1 To 49 E-value: 4e-24 Score: 101
RTCQSQSHKFKGACFSDTNCDSVCRTENFPRGQCNQHHVERKCYCERDC - 2. L01A003063 From 1 To 49 E-value: 2e-23 Score: 99.4
RTCQSQSHKFKGACFSDTNCASVCRTENFPRGQCNQHHVERKCYCERDC - 3. L01A003057 From 1 To 49 E-value: 3e-21 Score: 92
RTCESQSHKFKGPCFSDSNCATVCRTENFPRGQCNQHHVERKCYCERSC - 4. L03A000105 From 32 To 80 E-value: 0.00000000000009 Score: 67.4
RHCLSQSHRFKGMCVSSNNCANVCRTESFPDGECKSHGLERKCFCKKVC - 5. L12A10450| From 1 To 49 E-value: 0.0000000000006 Score: 64.3
RHCLSQSHRFKGMCVSSNNCANVCRTESFPDGECKSHGLERKCFCKKVC
Activity
- Antibacterial Activities
No MICs found on LAMP database
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Pukhalsky V.A.,Odintsova M.S.,Musolyamov A.K.,Egorov T.A.,Odintsova T.I.,
- Title:Seed defensins from T. kiharae and related species: Genome localization of defensin-encoding genes.
- Journal:Biochimie, 2007, 89, 605-612 [PubMed:17321030]
- [2] Yalpani N.,Musolyamov A.K.,Baranov Y.,Rogozhin E.A.,Odintsova T.I.,
- Title:Seed defensins of barnyard grass Echinochloa crusgalli (L.) Beauv.
- Journal:Biochimie, 2008, 90, 1667-1673 [PubMed:18625284]
Comments
- Comments
No comments found on LAMP database