Record in detail


General Info

  • lamp_id:L01A003061
  • Name:DEF6_TRIKH
  • FullName:Defensin Tk-AMP-D6
  • Source:Triticum kiharae
  • Mass:5098.7 Da
  • Sequence Length:46 aa
  • Isoelectric Point:7.97
  • Activity:Antimicrobial
  • Sequence
        RDCRSQSKTFVGLCVSDTNCASVCLTEHFPGGKCDGYRRCFCTKDC
  • Function:Plant defense peptide (By similarity).

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L01A003061    From 1 To 46 E-value: 5e-22 Score: 94.7
        RDCRSQSKTFVGLCVSDTNCASVCLTEHFPGGKCDGYRRCFCTKDC
  • 2. L01A003062    From 1 To 46 E-value: 3e-21 Score: 92
        RECRSQSKQFVGLCVSDTNCASVCLTEHFPGGKCDGYRRCFCTKDC
  • 3. L01A003060    From 1 To 46 E-value: 6e-20 Score: 87.8
        RECRSESKKFVGLCVSDTNCASVCLTERFPGGKCDGYRRCFCTKDC
  • 4. L01A003059    From 1 To 45 E-value: 0.0000000000001 Score: 67
        RDCTSQSHKFVGLCLSDRNCASVCLTEYFTGGKCD-HRRCVCTKGC
  • 5. L13A022530    From 1 To 47 E-value: 0.000000000005 Score: 61.6
        RECQSQSHRYKGACVHDTNCASVCQTEGFSGGKCVGFRGRCFCTKHC

Structure

  •   Domains
  •   1  Name:G_Purothionin    Interpro Link:IPR008177
  •   2  Name:Gamma-thionin    Interpro Link:IPR008176
  •   3  Name:Knot1    Interpro Link:IPR003614
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Pukhalsky V.A.,Odintsova M.S.,Musolyamov A.K.,Egorov T.A.,Odintsova T.I.,
  •   Title:Seed defensins from T. kiharae and related species: Genome localization of defensin-encoding genes.
  •   Journal:Biochimie, 2007, 89, 605-612  [PubMed:17321030]

Comments

  •   Comments

    •     No comments found on LAMP database



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