Record in detail
General Info
- lamp_id:L01A003607
- Name:DFB39_RAT
- FullName:Beta-defensin 39
- Source:Rattus norvegicus
- Mass:5822.8 Da
- Sequence Length:50 aa
- Isoelectric Point:9.47
- Activity:Antibacterial
- Sequence
IDSVKCFQKNNTCHTIRCPYFQDEVGTCYEGRGKCCQKRLLSIRVPKKKV - Function:Has antibacterial activity (By similarity).
Cross-Linking
- Cross-linking
- 1 Database:CAMP CAMPSQ2009
- 2 Database:dbAMP dbAMP_04559
- 3 Database:DRAMP DRAMP03449
- 4 Database:Uniprot Q32ZF7
- 5 Database:DEF DEF334
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L01A003607 From 1 To 50 E-value: 6e-25 Score: 104
IDSVKCFQKNNTCHTIRCPYFQDEVGTCYEGRGKCCQKRLLSIRVPKKKV - 2. L05ADEF191 From 25 To 72 E-value: 4e-20 Score: 88.6
DSIQCFQKNNTCHTNQCPYFQDEIGTCYDKRGKCCQKRLLHIRVPRKK - 3. L01A002611 From 2 To 49 E-value: 6e-20 Score: 87.8
DSIQCFQKNNTCHTNQCPYFQDEIGTCYDKRGKCCQKRLLHIRVPRKK - 4. L01A002457 From 1 To 36 E-value: 0.00000000000005 Score: 68.2
DSIQCFQKNNTCHTNQCPYFQDEIGTCYDRRGKCCQ - 5. L03A000152 From 24 To 62 E-value: 0.00000000005 Score: 58.2
LDTIKCLQGNNNCHIQKCPWFLLQVSTCYKGKGRCCQKR
Structure
- Domains
- 1 Name:Defensin_beta-typ Interpro Link:IPR001855
- Structures
No structs found on LAMP database
Activity
- Antibacterial Activities
No MICs found on LAMP database
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Zhang G.,Blecha F.,Sang Y.,Cai Y.,Patil A.A.,
- Title:Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract.
- Journal:Physiol. Genomics, 2005, 23, 5-17 [PubMed:16033865]
Comments
- Comments
No comments found on LAMP database