Record in detail
General Info
- lamp_id:L01A003626
- Name:DFB50_MOUSE
- FullName:Beta-defensin 50
- Source:Mus musculus
- Mass:5587.6 Da
- Sequence Length:50 aa
- Isoelectric Point:8.22
- Activity:Antibacterial
- Sequence
HPGTFHVRIKCMPKMTAVFGDNCSFYSSMGDLCNNTKSVCCMVPVRMDNI - Function:Has bactericidal activity (By similarity).
Cross-Linking
- Cross-linking
- 1 Database:dbAMP dbAMP_04503
- 2 Database:DRAMP DRAMP03398
- 3 Database:Uniprot Q6TU36
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L03A000175 From 24 To 73 E-value: 6e-26 Score: 107
HPGTFHVRIKCMPKMTAVFGDNCSFYSSMGDLCNNTKSVCCMVPVRMDNI - 2. L01A003626 From 1 To 50 E-value: 2e-25 Score: 105
HPGTFHVRIKCMPKMTAVFGDNCSFYSSMGDLCNNTKSVCCMVPVRMDNI - 3. L01A003614 From 1 To 50 E-value: 4e-18 Score: 82
HPGTVHVRFKCIPKIAAVFGDNCPFYGNVDGLCNDKKSVCCMVPVRLDNI - 4. L12A02303| From 43 To 69 E-value: 2.6 Score: 22.7
GTCCARCNCVPSGTAGNLDECPCYANM - 5. L06AT00250 From 30 To 56 E-value: 5.3 Score: 21.6
GTCCARSRCVPPGTAGNQEMCPCYASL
Structure
- Domains
No domains found on LAMP database
- Structures
No structs found on LAMP database
Activity
- Antibacterial Activities
No MICs found on LAMP database
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Dumpit R.,Ferguson C.,Clegg N.J.,Pritchard C.,Abbott D.E.,
- Title:Expressed sequence tag profiling identifies developmental and anatomic partitioning of gene expression in the mouse prostate.
- Journal:Genome Biol., 2003, 4, 0-0 [PubMed:14659016]
- [2] Zhang G.,Blecha F.,Sang Y.,Cai Y.,Patil A.A.,
- Title:Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract.
- Journal:Physiol. Genomics, 2005, 23, 5-17 [PubMed:16033865]
- [3] Goldstein S.,Zody M.C.,Hillier L.W.,Goodstadt L.,Church D.M.,
- Title:Lineage-specific biology revealed by a finished genome assembly of the mouse.
- Journal:PLoS Biol., 2009, 7, 0-0 [PubMed:19468303]
Comments
- Comments
No comments found on LAMP database