Record in detail


General Info

  • lamp_id:L02A000335
  • Name:H6_ONCMY
  • FullName:Non-histone chromosomal protein H6
  • Source:Oncorhynchus mykiss
  • Mass:1384.5 Da
  • Sequence Length:13 aa
  • Isoelectric Point:10.5
  • Activity:Antibacterial,Antifungal,Antiviral,
  • Sequence
        PKRKSATKGDEPA
  • Function:Non-histone protein that probably binds to the inner side of nucleosomal DNA, altering the association between the DNA and the nucleosome octamer.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L12A08907|    From 2 To 14 E-value: 0.025 Score: 28.5
        PKRKSATKGDEPA
  • 2. L02A000410    From 1 To 13 E-value: 0.026 Score: 28.1
        PKRKSATKGDEPA
  • 3. L02A000335    From 1 To 13 E-value: 0.026 Score: 28.1
        PKRKSATKGDEPA
  • 4. L01A002863    From 1 To 13 E-value: 0.027 Score: 28.1
        PKRKSATKGDEPA
  • 5. L13A010420    From 1 To 13 E-value: 0.03 Score: 28.1
        PKRKSATKGDEPA

Structure

  •   Domains
  •   1  Name:HMG14/HMG17    Interpro Link:IPR000079
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Dixon G.H.,Wong N.C.W.,Watson D.C.,
  •   Title:The complete amino-acid sequence of a trout-testis non-histone protein, H6, localized in a subset of nucleosomes and its similarity to calf-thymus non-histone proteins HMG-14 and HMG-17.
  •   Journal:Eur. J. Biochem., 1979, 95, 193-202  [MEDLINE:79213375]
  •   [2]  Smith V.J.,Kemp G.D.,Saint N.,Fernandes J.M.O.,
  •   Title:Oncorhyncin III: a potent antimicrobial peptide derived from the non-histone chromosomal protein H6 of rainbow trout, Oncorhynchus mykiss.
  •   Journal:Biochem. J., 2003, 373, 621-628  [MEDLINE:22726124]

Comments

  •   Comments

    •     No comments found on LAMP database



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