Record in detail


General Info

  • lamp_id:L03A000160
  • Name:SNAK1_SOLTU
  • FullName:Snakin-1
  • Source:Solanum tuberosum
  • Mass:9663.5 Da
  • Sequence Length:88 aa
  • Isoelectric Point:8.82
  • Activity:Antimicrobial
  • Sequence
        MKLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP
  • Function:Has an antimicrobial activity. Causes a rapid aggregation of both Gram-positive and Gram-negative bacteria, but the antimicrobial activity is not correlated with the capacity to aggregate bacteria.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L03A000160    From 1 To 88 E-value: 0 Score: 176
        MKLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP
  • 2. L01A000880    From 1 To 88 E-value: 2e-38 Score: 149
        MKLFLLTLLLVTLVITPSLIQTTMAGSNFCDSKCKLRCSKAGLADRCLKYCGVCCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP
  • 3. L01A001091    From 1 To 88 E-value: 3e-33 Score: 132
        MKVAFAAVLLICLVLSSSLFEVSMAGSAFCSSKCSKRCSRAGMKDRCMKFCGICCSKCNCVPSGTYGNKHECPCYRDMKNSKGKAKCP
  • 4. L01A001092    From 1 To 88 E-value: 8e-33 Score: 130
        MKVAFVAVLLICLVLSSSLFEVSMAGSAFCSSKCAKRCSRAGMKDRCTRFCGICCSKCRCVPSGTYGNKHECPCYRDMKNSKGKPKCP
  • 5. L01A002689    From 1 To 63 E-value: 7e-32 Score: 127
        GSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP

Structure

  •   Domains
  •   1  Name:GASA    Interpro Link:IPR003854
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Garcia-Olmedo F.,Molina A.,Madueno F.,Moreno M.,Segura A.,
  •   Title:Snakin-1, a peptide from potato that is active against plant pathogens.
  •   Journal:Mol. Plant Microbe Interact., 1999, 12, 16-23  [PubMed:9885189]

Comments

  •   Comments

    •     No comments found on LAMP database



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