Record in detail
General Info
- lamp_id:L05ADEF332
- Name:Q32ZF5_RAT
- FullName:
- Source:Rattus norvegicus
- Mass:8791.4 Da
- Sequence Length:79 aa
- Isoelectric Point:8.87
- Activity:Antimicrobial
- Sequence
MRSHSFLSALFLLVMMMPRGKAGVVPGEKQCILLKGVCKDVSCTSTDDTIGVCNDEKKCCRRWWVFDPYPTPVPKGKSP - Function:null
Cross-Linking
- Cross-linking
- 1 Database:DRAMP DRAMP03451
- 2 Database:Uniprot Q32ZF5
- 3 Database:DEF DEF332
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L05ADEF332 From 1 To 79 E-value: 5.99756e-43 Score: 164
MRSHSFLSALFLLVMMMPRGKAGVVPGEKQCILLKGVCKDVSCTSTDDTIGVCNDEKKCCRRWWVFDPYPTPVPKGKSP - 2. L12A08015| From 1 To 79 E-value: 7e-31 Score: 124
MKLHSLISVLLLFVTLIPKGKTGVIPGQKQCIALKGVCRDKLCSTLDDTIGICNEGKKCCRRWWILEPYPTPVPKGKSP - 3. L01A003696 From 1 To 57 E-value: 3e-23 Score: 99
GVIPGQKQCIALKGVCRDKLCSTLDDTIGICNEGKKCCRRWWILEPYPTPVPKGKSP - 4. L05ADEF326 From 18 To 73 E-value: 0.00000000003 Score: 58.5
PRVRSGLGAAETHCVNLQGICRRDICKLIEDEIGACRRRWKCCRLWWVLLPIPTPV - 5. L01A003710 From 1 To 51 E-value: 0.0000000002 Score: 55.8
GLGPAEGHCLNLSGVCRRDVCKVVEDQIGACRRRMKCCRAWWILMPIPTPL
Structure
- Domains
- 1 Name:Defensin_beta-typ Interpro Link:IPR001855
- Structures
No structs found on LAMP database
Activity
- Antibacterial Activities
No MICs found on LAMP database
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Sodergren E.J.,Muzny D.M.,Metzker M.L.,Weinstock G.M.,Gibbs R.A.,
- Title:Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
- Journal:Nature, 2004, 428, 493-521 [PubMed:15057822]
- [2] Zhang G.,Blecha F.,Sang Y.,Cai Y.,Patil A.A.,
- Title:Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract.
- Journal:Physiol. Genomics, 2005, 23, 5-17 [PubMed:16033865]
Comments
- Comments
No comments found on LAMP database