Record in detail

lamp_id:L05ADEF347
Name:Q32ZG8_RAT
FullName:
Source:Rattus norvegicus
Mass:9618.2 Da
Sequence Length:83 aa
Isoelectric Point:8.84
Activity:Antimicrobial
Sequence
MKLVLLLLAIFVTTELVMSGKNPTLQCMGNRGFCRPSCKKGEQAYFYCRTYQICCLQSHVRISLTGVEDNTNWSYEKHWPRIP
Function:null

Top similar AMPs on LAMP
1. L05ADEF347 From 1 To 83 E-value: 0 Score: 177
MKLVLLLLAIFVTTELVMSGKNPTLQCMGNRGFCRPSCKKGEQAYFYCRTYQICCLQSHVRISLTGVEDNTNWSYEKHWPRIP
2. L02A001513 From 1 To 64 E-value: 4e-36 Score: 141
GKNPTLQCMGNRGFCRPSCKKGEQAYFYCRTYQICCLQSHVRISLTGVEDNTNWSYEKHWPRIP
3. L01A003020 From 1 To 64 E-value: 2e-32 Score: 129
GKNPILQCMGNRGFCRSSCKKSEQAYFYCRTFQMCCLQSYVRISLTGVDDNTNWSYEKHWPRIP
4. L12A07992| From 1 To 83 E-value: 2e-30 Score: 122
MKLFLLLLAVFVATELVISGKSPVLHCLSNRGFCRSSCKKDEQPYFYCRNFQTCCLQSYVRISLTGIDEDTNWSYDKHWPKIP
5. L13A018614 From 1 To 50 E-value: 2e-26 Score: 109
GKNPTLQCMGNRGFCRPSCKKGEQAYFYCRTYQICCLQSHVRISLTGVED

Reference
[1] Sodergren E.J.,Muzny D.M.,Metzker M.L.,Weinstock G.M.,Gibbs R.A.,
Title:Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
Journal:Nature, 2004, 428, 493-521 [PubMed:15057822]
[2] Zhang G.,Blecha F.,Sang Y.,Cai Y.,Patil A.A.,
Title:Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract.
Journal:Physiol. Genomics, 2005, 23, 5-17 [PubMed:16033865]
[3] Yao A.,Turner R.,Miller J.,Di Francesco V.,Florea L.,
Title:Gene and alternative splicing annotation with AIR.
Journal:Genome Res., 2005, 15, 54-66 [PubMed:15632090]
[4] French F.S.,Radhakrishnan Y.,Wingard C.J.,Chintalgattu V.,Yenugu S.,
Title:Identification, cloning and functional characterization of novel beta-defensins in the rat (Rattus norvegicus).
Journal:Reprod. Biol. Endocrinol., 2006, 4, 7-7 [PubMed:16457734]