Record in detail
General Info
- lamp_id:L06AT00037
- Name:DEF02_ARATH
- FullName:Defensin-like protein 2
- Source:Arabidopsis thaliana
- Mass:5283.9 Da
- Sequence Length:47 aa
- Isoelectric Point:8.81
- Activity:Antimicrobial
- Sequence
RTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC - Function:Confers broad-spectrum resistance to pathogens.
Cross-Linking
- Cross-linking
- 1 Database:CAMP CAMPSQ4494
- 2 Database:dbAMP dbAMP_10797
- 3 Database:DRAMP DRAMP00458
- 4 Database:SATPdb satpdb25873
- 5 Database:Uniprot Q39182
- 6 Database:PHY PHYT00037
Top similar AMPs
- Top similar AMPs on LAMP
- 1. L03A000162 From 31 To 77 E-value: 6e-23 Score: 97.8
RTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC - 2. L06AT00037 From 1 To 47 E-value: 1e-21 Score: 93.2
RTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC - 3. L12A06235| From 31 To 77 E-value: 5e-19 Score: 84.7
RTCESQSHRFKGLCFSKSNCASVCHTEGFYGGHCRGFRRRCFCTRHC - 4. L05ADEF281 From 31 To 77 E-value: 7e-19 Score: 84.3
RTCESKSHRFKGPCVSTHNCANVCHNEGFGGGKCRGFRRRCYCTRHC - 5. L03A000169 From 32 To 78 E-value: 4e-18 Score: 81.6
RTCESQSHKFKGTCLSDTNCANVCHSERFSGGKCRGFRRRCFCTTHC
Activity
- Antibacterial Activities
No MICs found on LAMP database
Toxicity
- Toxicity
No toxicity records found on LAMP database
Reference
- Reference
- [1] Rouze P.,Chiapello H.,Amselem J.,Desprez T.,Hoefte H.,
- Title:An inventory of 1152 expressed sequence tags obtained by partial sequencing of cDNAs from Arabidopsis thaliana.
- Journal:Plant J., 1993, 4, 1051-1061 [MEDLINE:94108489]
- [2] Broekaert W.F.,Thomma B.P.H.J.,
- Title:Tissue-specific expression of plant defensin genes PDF2.1 and PDF2.2 in Arabidopsis thaliana.
- Journal:Plant Physiol. Biochem., 1998, 36, 533-537 [:]
- [3] Benito M.-I.,Shea T.P.,Rounsley S.D.,Kaul S.,Lin X.,
- Title:Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana.
- Journal:Nature, 1999, 402, 761-768 [MEDLINE:20083487]
- [4] Cock J.M.,Dumas C.,Miege C.,Vanoosthuyse V.,
- Title:Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response.
- Journal:Plant Mol. Biol., 2001, 46, 17-34 [MEDLINE:21330246]
- [5] Thevissen K.,Cammue B.P.,Thomma B.P.H.J.,
- Title:Plant defensins.
- Journal:Planta, 2002, 216, 193-202 [PubMed:12447532]
- [6] Shinn P.,Chen H.,Dale J.M.,Lim J.,Yamada K.,
- Title:Empirical analysis of transcriptional activity in the Arabidopsis genome.
- Journal:Science, 2003, 302, 842-846 [MEDLINE:22954850]
- [7] VandenBosch K.A.,Paape T.D.,Graham M.A.,Silverstein K.A.T.,
- Title:Genome organization of more than 300 defensin-like genes in Arabidopsis.
- Journal:Plant Physiol., 2005, 138, 600-610 [PubMed:15955924]
Comments
- Comments
No comments found on LAMP database