Record in detail

lamp_id:L06AT00058
Name:THNA_HORVU
FullName:Alpha-hordothionin
Source:Hordeum vulgare
Mass:4483.3 Da
Sequence Length:42 aa
Isoelectric Point:9.68
Activity:Antimicrobial
Sequence
KSCCRSTLGRNCYNLCRVRGAQKLCAGVCRCKLTSSGKCPTG
Function:Thionins are small plant proteins which are toxic to animal cells. They seem to exert their toxic effect at the level of the cell membrane. Their precise function is not known.

Top similar AMPs on LAMP
1. L12A05349| From 1 To 42 E-value: 3e-18 Score: 82
KSCCRSTLGRNCYNLCRVRGAQKLCAGVCRCKLTSSGKCPTG
2. L06AT00058 From 1 To 42 E-value: 3e-18 Score: 82
KSCCRSTLGRNCYNLCRVRGAQKLCAGVCRCKLTSSGKCPTG
3. L06AT00059 From 1 To 41 E-value: 0.000000000000008 Score: 70.9
KSCCRSTLGRNCYNLCRVRGAQKLCANACRCKLTSGLKCPS
4. L13A025115 From 1 To 42 E-value: 0.00000000000001 Score: 70.1
KSCCRSTLGRNCYNLCRARGAQKLCAGVCRCKISSGLSCPKG
5. L06AT00056 From 1 To 40 E-value: 0.00000000000008 Score: 67.4
KSCCKSTLGRNCYNLCRARGAQKLCANVCRCKLTSGLSCP

Reference
[1] Nakanishi T.,Matsubara H.,Hase T.,Wada K.,Ozaki Y.,
Title:Amino acid sequence of a purothionin homolog from barley flour.
Journal:J. Biochem., 1980, 87, 549-555 [MEDLINE:80137408]
[2] Carbonero P.,Garcia-Olmedo F.,Hernandez-Lucas C.,Paz-Ares J.,Ponz F.,
Title:Cloning and nucleotide sequence of a cDNA encoding the precursor of the barley toxin alpha-hordothionin.
Journal:Eur. J. Biochem., 1986, 156, 131-135 [MEDLINE:86164332]
[3] Garcia-Olmedo F.,Carbonero P.,Pintor-Toro J.A.,Rodriguez-Palenzuela P.,
Title:Nucleotide sequence and endosperm-specific expression of the structural gene for the toxin alpha-hordothionin in barley (Hordeum vulgare L.).
Journal:Gene, 1988, 70, 271-281 [MEDLINE:89108011]
[4] Flengsrud R.,Kristoffersen H.E.,
Title:Separation and characterization of basic barley seed proteins.
Journal:Electrophoresis, 2000, 21, 3693-3700 [MEDLINE:21088911]