Record in detail


General Info

  • lamp_id:L06AT00159
  • Name:CYH3_VIOHE
  • FullName:Cycloviolacin-H3
  • Source:Viola hederacea
  • Mass:3101.5 Da
  • Sequence Length:30 aa
  • Isoelectric Point:4.19
  • Activity:Antimicrobial
  • Sequence
        GLPVCGETCFGGTCNTPGCICDPWPVCTRN
  • Function:Probably participates in a plant defense mechanism.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L06AT00159    From 1 To 30 E-value: 0.000000000003 Score: 62.4
        GLPVCGETCFGGTCNTPGCICDPWPVCTRN
  • 2. L13A017297    From 1 To 30 E-value: 0.00000000001 Score: 60.5
        GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
  • 3. L13A011084    From 1 To 30 E-value: 0.00000000001 Score: 60.5
        GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
  • 4. L02A001112    From 1 To 30 E-value: 0.00000000002 Score: 59.3
        GLPVCGETCFGGTCNTPGCACDPWPVCTRD
  • 5. L02A001113    From 1 To 30 E-value: 0.00000000003 Score: 58.9
        GLPVCGESCFGGTCNTPGCACDPWPVCTRD

Structure

  •   Domains
  •   1  Name:Cyclotide    Interpro Link:IPR005535
  •   2  Name:Cyclotide_moebius_CS    Interpro Link:IPR012324
  •   3  Name:Cyclotide_subgr    Interpro Link:IPR017307
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Gustafson K.R.,Rosengren K.J.,Daly N.L.,Colgrave M.L.,Chen B.,
  •   Title:Isolation and characterization of novel cyclotides from Viola hederaceae: solution structure and anti-HIV activity of vhl-1, a leaf-specific expressed cyclotide.
  •   Journal:J. Biol. Chem., 2005, 280, 22395-22405  [PubMed:15824119]

Comments

  •   Comments

    •     No comments found on LAMP database



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