Record in detail


General Info

  • lamp_id:L06AT00180
  • Name:CYO5_VIOOD
  • FullName:Cycloviolacin-O5
  • Source:Viola odorata
  • Mass:3137.7 Da
  • Sequence Length:30 aa
  • Isoelectric Point:8.11
  • Activity:Antimicrobial
  • Sequence
        GTPCGESCVWIPCISSAVGCSCKNKVCYKN
  • Function:Probably participates in a plant defense mechanism.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L06AT00180    From 1 To 30 E-value: 0.000000000005 Score: 61.6
        GTPCGESCVWIPCISSAVGCSCKNKVCYKN
  • 2. L06AT00179    From 1 To 30 E-value: 0.00000000004 Score: 58.5
        GIPCGESCVWIPCISSAIGCSCKNKVCYRN
  • 3. L06AT00168    From 1 To 30 E-value: 0.00000000007 Score: 57.8
        GIPCGESCVWIPCISAAIGCSCKNKVCYRN
  • 4. L01A000224    From 1 To 30 E-value: 0.00000000008 Score: 57.4
        GIPCGESCVWIPCISAALGCSCKNKVCYRN
  • 5. L12A05610|    From 64 To 91 E-value: 0.0000000001 Score: 57
        PCGESCVFIPCISSVLGCSCKNKVCYRN

Structure

  •   Domains
  •   1  Name:Cyclotide    Interpro Link:IPR005535
  •   2  Name:Cyclotide_bracelet_CS    Interpro Link:IPR012323
  •   3  Name:Cyclotide_subgr    Interpro Link:IPR017307
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Waine C.,Bond T.,Daly N.L.,Craik D.J.,
  •   Title:Plant cyclotides: a unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.
  •   Journal:J. Mol. Biol., 1999, 294, 1327-1336  [MEDLINE:20069951]
  •   [2]  Craik D.J.,Colgrave M.L.,Ireland D.C.,
  •   Title:A novel suite of cyclotides from Viola odorata: sequence variation and the implications for structure, function and stability.
  •   Journal:Biochem. J., 2006, 400, 1-12  [PubMed:16872274]

Comments

  •   Comments

    •     No comments found on LAMP database



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