Record in detail


General Info

  • lamp_id:L06AT00181
  • Name:CYO6_VIOOD
  • FullName:Cycloviolacin-O6
  • Source:Viola odorata
  • Mass:3207.8 Da
  • Sequence Length:31 aa
  • Isoelectric Point:8.11
  • Activity:Antimicrobial
  • Sequence
        GTLPCGESCVWIPCISAAVGCSCKSKVCYKN
  • Function:Probably participates in a plant defense mechanism.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L06AT00181    From 1 To 31 E-value: 0.000000000001 Score: 63.2
        GTLPCGESCVWIPCISAAVGCSCKSKVCYKN
  • 2. L06AT00163    From 1 To 31 E-value: 0.000000000004 Score: 61.6
        GTLPCGESCVWIPCISAVVGCSCKSKVCYKN
  • 3. L06AT00183    From 1 To 31 E-value: 0.000000000009 Score: 60.5
        GTLPCGESCVWIPCISSVVGCSCKSKVCYKN
  • 4. L12A12205|    From 57 To 87 E-value: 0.00000000001 Score: 60.1
        GTIPCGESCVFIPCLTSAIGCSCKSKVCYKN
  • 5. L12A11674|    From 59 To 89 E-value: 0.00000000001 Score: 60.1
        GTIPCGESCVFIPCLTSAIGCSCKSKVCYKN

Structure

  •   Domains
  •   1  Name:Cyclotide    Interpro Link:IPR005535
  •   2  Name:Cyclotide_bracelet_CS    Interpro Link:IPR012323
  •   3  Name:Cyclotide_subgr    Interpro Link:IPR017307
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Waine C.,Bond T.,Daly N.L.,Craik D.J.,
  •   Title:Plant cyclotides: a unique family of cyclic and knotted proteins that defines the cyclic cystine knot structural motif.
  •   Journal:J. Mol. Biol., 1999, 294, 1327-1336  [MEDLINE:20069951]
  •   [2]  Craik D.J.,Colgrave M.L.,Ireland D.C.,
  •   Title:A novel suite of cyclotides from Viola odorata: sequence variation and the implications for structure, function and stability.
  •   Journal:Biochem. J., 2006, 400, 1-12  [PubMed:16872274]

Comments

  •   Comments

    •     No comments found on LAMP database



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