Record in detail


General Info

  • lamp_id:L06AT00211
  • Name:VARB_VIOAR
  • FullName:Varv peptide B
  • Source:Viola arvensis
  • Mass:3093.5 Da
  • Sequence Length:30 aa
  • Isoelectric Point:4.19
  • Activity:Antimicrobial
  • Sequence
        GLPVCGETCFGGTCNTPGCSCDPWPMCSRN
  • Function:Probably participates in a plant defense mechanism.

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L06AT00211    From 1 To 30 E-value: 0.000000000002 Score: 63.2
        GLPVCGETCFGGTCNTPGCSCDPWPMCSRN
  • 2. L06AT00216    From 1 To 30 E-value: 0.00000000001 Score: 60.5
        GVPVCGETCFGGTCNTPGCSCDPWPVCSRN
  • 3. L13A017297    From 1 To 30 E-value: 0.00000000002 Score: 59.7
        GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
  • 4. L13A011084    From 1 To 30 E-value: 0.00000000002 Score: 59.7
        GLPVCGETCFGGTCNTPGCTCDPWPVCTRN
  • 5. L06AT00159    From 1 To 30 E-value: 0.00000000003 Score: 58.9
        GLPVCGETCFGGTCNTPGCICDPWPVCTRN

Structure

  •   Domains
  •   1  Name:Cyclotide    Interpro Link:IPR005535
  •   2  Name:Cyclotide_moebius_CS    Interpro Link:IPR012324
  •   3  Name:Cyclotide_subgr    Interpro Link:IPR017307
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

  •     No MICs found on LAMP database

Toxicity

  •   Toxicity

  •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Claeson P.,Bohlin L.,Johansson S.,Luijendijk T.,Goeransson U.,
  •   Title:Seven novel macrocyclic polypeptides from Viola arvensis.
  •   Journal:J. Nat. Prod., 1999, 62, 283-286  [MEDLINE:99177275]

Comments

  •   Comments

  •     No comments found on LAMP database



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