Record in detail


General Info

  • lamp_id:L06AT00245
  • Name:A9NP30_PICSI
  • FullName:
  • Source:Picea sitchensis
  • Mass:7278.5 Da
  • Sequence Length:66 aa
  • Isoelectric Point:8.83
  • Activity:Antimicrobial
  • Sequence
        GRLHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
  • Function:null

Cross-Linking

Top similar AMPs

  • Top similar AMPs on LAMP
  • 1. L06AT00245    From 1 To 66 E-value: 8e-34 Score: 134
        GRLHPSECGGRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
  • 2. L01A000863    From 10 To 75 E-value: 1e-31 Score: 126
        GSLRPSECGQRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTFGNKQVCPCYNNWKTQQGGPKCP
  • 3. L06AT00243    From 1 To 66 E-value: 2e-31 Score: 125
        GSLRPSECGQRCSYRCSATSHKKPCMFFCQKCCAKCLCVPPGTFGNKQVCPCYNNWKTQQGGPKCP
  • 4. L01A000882    From 32 To 97 E-value: 5e-30 Score: 121
        GTLRPSDCKPKCTYRCSATSHKKPCMFFCQKCCAKCLCVPPGTYGNKQICPCYNSWKTKEGGPKCP
  • 5. L01A000873    From 1 To 66 E-value: 1e-27 Score: 113
        GRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP

Structure

  •   Domains
  •   1  Name:GASA    Interpro Link:IPR003854
  •   Structures

        No structs found on LAMP database

Activity

  •   Antibacterial Activities

    •     No MICs found on LAMP database

Toxicity

  •   Toxicity

    •     No toxicity records found on LAMP database

Reference

  •   Reference
  •   [1]  Oddy C.,Cooper D.,Kolosova N.,Chun H.J.,Ralph S.G.,
  •   Title:A conifer genomics resource of 200,000 spruce (Picea spp.) ESTs and 6,464 high-quality, sequence-finished full-length cDNAs for Sitka spruce (Picea sitchensis).
  •   Journal:BMC Genomics, 2008, 9, 484-484  [PubMed:18854048]

Comments

  •   Comments

    •     No comments found on LAMP database



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